Gene : SOX2 - ENSG00000181449 - Homo sapiens (human)
General information
Gene identifier
ENSG00000181449
Name
SOX2
Description
SRY-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11195]
Organism
Synonym(s)
Orthologs
Expression
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0010533metanephros cortex | 30.86 | 0.266 | See source data | |
| CL:0000576monocyte | 38.25 | 0.782 | See source data | |
| UBERON:0000979tibia | 38.93 | 0.857 | See source data | |
| CL:0002255stromal cell of endometrium | 38.95 | 0.773 | See source data | |
| UBERON:0001304germinal epithelium of ovary | 40.33 | 0.951 | See source data | |
| UBERON:0001765mammary duct | 40.59 | 0.867 | See source data | |
| UBERON:0001812palpebral conjunctiva | 41.10 | 0.788 | See source data | |
| UBERON:0001614superficial temporal artery | 41.33 | 0.703 | See source data | |
| CL:0000019sperm | 42.39 | 0.328 | See source data | |
| CL:0000655secondary oocyte | 42.57 | 0.857 | See source data | |
| CL:0002092bone marrow cell | 42.64 | 1 | See source data | |
| CL:0000094granulocyte | 43.17 | 0.059 | See source data | |
| UBERON:0004511skeletal muscle tissue of rectus abdominis | 43.37 | 0.893 | See source data | |
| UBERON:0001987placenta | 44.41 | 0.803 | See source data | |
| UBERON:0004811endometrium epithelium | 46.85 | 1 | See source data | |
| UBERON:0001103diaphragm | 47.05 | 0.99 | See source data | |
| UBERON:0008266periodontal ligament | 47.14 | 0.5 | See source data | |
| UBERON:0001231nephron tubule | 47.39 | 0.975 | See source data | |
| UBERON:0000074renal glomerulus | 47.60 | 0.999 | See source data | |
| UBERON:0004736metanephric glomerulus | 47.74 | 0.999 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Sources of raw data:
- Affymetrix data: ArrayExpress, GEO
- RNA-Seq data: GEO, GTEx - dbGAP, SRA
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Homininae | 2 species | 2 genes | Compare expression | |
| Catarrhini | 6 species | 6 genes | Compare expression | |
| Simiiformes | 7 species | 7 genes | Compare expression | |
| Euarchontoglires | 10 species | 10 genes | Compare expression | |
| Boreoeutheria | 14 species | 14 genes | Compare expression | |
| Amniota | 15 species | 15 genes | Compare expression | |
| Tetrapoda | 16 species | 16 genes | Compare expression | |
| Sarcopterygii | 17 species | 17 genes | Compare expression | |
| Euteleostomi | 30 species | 31 genes | Compare expression |
Cross-references
CCDS
Ensembl
HGNC
EMBL
GeneCards
UniProtKB/Swiss-Prot