Search Genes

Gene : col2a1b - ENSGACG00000006819 - Gasterosteus aculeatus (Three-spined stickleback)

General information

Expressed in camera-type eye and 4 other cell types or tissues.

Gene identifier

ENSGACG00000006819

Name

col2a1b

Description

collagen, type II, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-050302-9]

Organism

Gasterosteus aculeatus (Three-spined stickleback)

Synonym(s)

Orthologs

43 orthologs

Paralogs

174 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Percomorphaceae	5 species Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish)	5 genes ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1	Compare expression
Acanthomorphata	6 species Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish)	6 genes ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1	Compare expression
Euteleosteomorpha	8 species Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish)	9 genes ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1	Compare expression
Clupeocephala	9 species Danio rerio (zebrafish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish)	10 genes ENSDARG00000011407 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1	Compare expression
Teleostei	10 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish)	11 genes ENSDARG00000011407 col2a1b 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1	Compare expression
Neopterygii	11 species Danio rerio (zebrafish) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish)	12 genes ENSDARG00000011407 col2a1b ENSLOCG00000005115 col2a1b 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1	Compare expression
Euteleostomi	41 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	42 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSDARG00000011407 col2a1b ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 397739 col2a1.S ENSXETG00000010655 col2a1 ENSACAG00000006064 COL2A1 ENSLOCG00000005115 col2a1b 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1 ENSLACG00000019101 COL2A1	Compare expression
Chordata	42 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	43 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSDARG00000011407 col2a1b ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 397739 col2a1.S ENSXETG00000010655 col2a1 ENSACAG00000006064 COL2A1 ENSLOCG00000005115 col2a1b 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSNFUG00015008689 COL2A1 BL01498 COL1A2 ENSLACG00000019101 COL2A1	Compare expression

Showing 1 to 8 of 8 entries

Orthology information comes from OMA : ENSGACG00000006819.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison
Vertebrata	4 genes ENSGACG00000003112 col2a1a ENSGACG00000003361 col1a1b ENSGACG00000005143 col1a1a ENSGACG00000006511 col1a2	Compare expression: table \| graph
Chordata	5 genes ENSGACG00000002409 col5a2a ENSGACG00000003112 col2a1a ENSGACG00000003361 col1a1b ENSGACG00000005143 col1a1a ENSGACG00000006511 col1a2	Compare expression: table \| graph
Opisthokonta	174 genes ENSGACG00000000250 ints6 ENSGACG00000000304 nfxl1 ENSGACG00000000385 dyrk3 ENSGACG00000000486 ANKRD52 ENSGACG00000000539 cdk2 ENSGACG00000000585 cdk4 ENSGACG00000000600 SRPK3 ENSGACG00000000810 cdk20 ENSGACG00000000939 dek ENSGACG00000001042 SRSF3 ENSGACG00000001116 ECHDC3 ENSGACG00000001126 ENSGACG00000001473 srsf3a ENSGACG00000001538 arglu1a ENSGACG00000001727 GAS8 ENSGACG00000001855 rbmx2 ENSGACG00000001943 itgbl1 ENSGACG00000001987 gsk3aa ENSGACG00000002039 lrrc40 ENSGACG00000002102 ENSGACG00000002114 cdk10 ENSGACG00000002409 col5a2a ENSGACG00000002518 cdk1 ENSGACG00000003046 rad23ab ENSGACG00000003112 col2a1a ENSGACG00000003151 cdk8 ENSGACG00000003361 col1a1b ENSGACG00000003365 tial1 ENSGACG00000003532 ENSGACG00000003629 gsk3ba ENSGACG00000003742 si:ch211-220i18.4 ENSGACG00000003777 zgc:171775 ENSGACG00000003819 sf3b4 ENSGACG00000003843 lpp ENSGACG00000004114 ENKD1 ENSGACG00000004426 CELF2 ENSGACG00000004477 hnrnpa3 ENSGACG00000004749 CIR1 ENSGACG00000004803 sf3b6 ENSGACG00000004911 mapk13 ENSGACG00000005143 col1a1a ENSGACG00000005157 ccdc173 ENSGACG00000005177 cdk11b ENSGACG00000005445 fbxl2 ENSGACG00000005641 ENSGACG00000005706 mapk8b ENSGACG00000005805 rad23aa ENSGACG00000005886 prpf40a ENSGACG00000005957 PRC1 ENSGACG00000005986 tra2b ENSGACG00000006084 srsf6a ENSGACG00000006323 cdk6 ENSGACG00000006364 ENSGACG00000006511 col1a2 ENSGACG00000006602 CDK19 ENSGACG00000006712 kri1 ENSGACG00000006748 fam184a ENSGACG00000006784 cfap45 ENSGACG00000006785 echs1 ENSGACG00000006878 tra2a ENSGACG00000006934 alg6 ENSGACG00000007039 MAPK8 ENSGACG00000007218 plk2b ENSGACG00000007479 ENSGACG00000007667 srpk1b ENSGACG00000007676 mapk14b ENSGACG00000007834 srsf5b ENSGACG00000008084 ankrd28b ENSGACG00000008145 srpk1a ENSGACG00000008157 mapk14a ENSGACG00000008165 cwf19l2 ENSGACG00000008615 si:ch211-257p13.3 ENSGACG00000008627 luc7l ENSGACG00000008716 limk2 ENSGACG00000008799 limk1a ENSGACG00000008817 ankrd44 ENSGACG00000008825 ENSGACG00000008848 smc1al ENSGACG00000008904 fbxl20 ENSGACG00000008970 ncl ENSGACG00000009395 cnot3b ENSGACG00000009434 tmf1 ENSGACG00000009435 ENSGACG00000009447 gsk3ab ENSGACG00000009525 rps6ka1 ENSGACG00000009585 si:ch211-166a6.5 ENSGACG00000009689 smc1b ENSGACG00000009848 cdk7 ENSGACG00000009961 lrrc23 ENSGACG00000010109 TRA2B ENSGACG00000010187 ENSGACG00000010267 dnajc9 ENSGACG00000010340 zyx ENSGACG00000010619 MOK ENSGACG00000010642 tln2b ENSGACG00000010657 elavl1a ENSGACG00000010731 pak2a ENSGACG00000010842 ankrd52a ENSGACG00000011069 pak2b ENSGACG00000011152 elavl4 ENSGACG00000011261 rnps1 ENSGACG00000011310 rps6ka5 ENSGACG00000011489 cnot3a ENSGACG00000011761 srsf5a ENSGACG00000011842 cdkl1 ENSGACG00000011922 cog6 ENSGACG00000012098 SRPK3 ENSGACG00000012237 wasa ENSGACG00000012311 ENSGACG00000012417 ankrd39 ENSGACG00000012418 kctd9a ENSGACG00000012598 luc7l3 ENSGACG00000012612 rbm28 ENSGACG00000012670 lrrc34 ENSGACG00000012811 rps6ka3a ENSGACG00000012821 ENSGACG00000013087 sel1l ENSGACG00000013102 mapk3 ENSGACG00000013257 pak1 ENSGACG00000013294 TIA1 ENSGACG00000013328 ALYREF ENSGACG00000013329 elavl1a ENSGACG00000013390 mapk12a ENSGACG00000013603 ppp1r7 ENSGACG00000013777 plk3 ENSGACG00000013839 elavl3 ENSGACG00000014226 celf1 ENSGACG00000014421 mapk1 ENSGACG00000014429 zgc:85722 ENSGACG00000014479 GAS8 ENSGACG00000014550 txlng ENSGACG00000014978 ENSGACG00000015147 stk16 ENSGACG00000015206 ENSGACG00000015586 ENSGACG00000015709 ENSGACG00000015800 tia1 ENSGACG00000015833 mns1 ENSGACG00000015906 GAS8 ENSGACG00000015946 fip1l1b ENSGACG00000016004 zgc:158803 ENSGACG00000016035 rps6ka2 ENSGACG00000016368 tln2a ENSGACG00000016396 mapk10 ENSGACG00000016450 tlk1b ENSGACG00000016526 PLK1 ENSGACG00000016541 RAD23B ENSGACG00000017313 ENSGACG00000017394 prc1b ENSGACG00000017419 mfap1 ENSGACG00000017647 sfswap ENSGACG00000017975 cdk5 ENSGACG00000018076 mapk9 ENSGACG00000018085 eci2 ENSGACG00000018178 ALYREF ENSGACG00000018517 cdk9 ENSGACG00000018545 rps6kal ENSGACG00000018584 tln1 ENSGACG00000018623 ints6l ENSGACG00000018637 ENSGACG00000018688 shoc2 ENSGACG00000018723 syvn1 ENSGACG00000018821 waslb ENSGACG00000018843 ENSGACG00000019088 ENSGACG00000019107 mapk11 ENSGACG00000019108 mapk12b ENSGACG00000019484 elavl2 ENSGACG00000020137 slirp ENSGACG00000020235 ENSGACG00000020273 rps6ka4 ENSGACG00000020464 tcerg1a ENSGACG00000020489 LIMK1 ENSGACG00000020703 PAK3	Compare expression: table \| graph

Showing 1 to 3 of 3 entries

Paralogy information comes from OMA : ENSGACG00000006819.

Cross-references

Ensembl

ENSGACG00000006819 (col2a1b)

ZFIN

ZDB-GENE-050302-9 (col2a1b)

UniProtKB/TrEMBL

G3NUQ0,G3NUQ0_GASAC,G3NUQ7,G3NUQ7_GASAC