Search Genes

Gene : col2a1b - ENSLOCG00000005115 - Lepisosteus oculatus (Spotted gar)

General information

Expressed in camera-type eye and 10 other cell types or tissues.

Gene identifier

ENSLOCG00000005115

Name

col2a1b

Description

collagen type II alpha 1 chain [Source:NCBI gene;Acc:102690261]

Organism

Lepisosteus oculatus (Spotted gar)

Synonym(s)

Orthologs

44 orthologs

Paralogs

158 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Neopterygii	11 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	13 genes ENSDARG00000011407 col2a1b 118207188 LOC118207188 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSGACG00000006819 col2a1b ENSNFUG00015008689 COL2A1	Compare expression
Euteleostomi	41 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	43 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSDARG00000011407 col2a1b ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 397739 col2a1.S ENSXETG00000010655 col2a1 ENSACAG00000006064 COL2A1 118207188 LOC118207188 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSGACG00000006819 col2a1b ENSNFUG00015008689 COL2A1 ENSLACG00000019101 COL2A1	Compare expression
Chordata	42 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig) Gallus gallus (chicken) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Anolis carolinensis (green anole) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	44 genes ENSG00000139219 COL2A1 ENSMUSG00000022483 Col2a1 ENSDARG00000011407 col2a1b ENSCAFG00000009059 COL2A1 ENSFCAG00000014002 COL2A1 ENSECAG00000022313 COL2A1 ENSSSCG00000025523 COL2A1 ENSBTAG00000013155 COL2A1 ENSCHIG00000009616 COL2A1 ENSOARG00000019333 COL2A1 ENSOCUG00000013629 COL2A1 ENSCPOG00000000832 COL2A1 ENSGALG00000030712 COL2A1 ENSOANG00000042168 COL2A1 ENSCJAG00000015054 COL2A1 ENSCATG00000043631 COL2A1 ENSMFAG00000031247 COL2A1 ENSMMUG00000011444 COL2A1 ENSMNEG00000034245 COL2A1 ENSPANG00000020674 COL2A1 ENSGGOG00000004310 COL2A1 ENSPPAG00000027130 ENSPTRG00000004871 COL2A1 ENSMICG00000009035 COL2A1 ENSCSAG00000006460 COL2A1 108392454 COL2A1 ENSRNOG00000058560 Col2a1 397739 col2a1.S ENSXETG00000010655 col2a1 ENSACAG00000006064 COL2A1 118207188 LOC118207188 118210570 col2a1b ENSELUG00000034350 COL2A1 ENSSSAG00000064261 COL2A1 ENSSSAG00000075845 COL2A1 ENSGMOG00000001436 col2a1b ENSPREG00000007539 COL2A1 ENSORLG00000005102 col2a1a ENSACLG00000017863 col2a1b ENSSMAG00000013036 COL2A1 ENSGACG00000006819 col2a1b ENSNFUG00015008689 COL2A1 BL01498 COL1A2 ENSLACG00000019101 COL2A1	Compare expression

Showing 1 to 3 of 3 entries

Orthology information comes from OMA : ENSLOCG00000005115.

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison
Vertebrata	2 genes ENSLOCG00000010835 col1a2 ENSLOCG00000013046 col1a1b	Compare expression: table \| graph
Chordata	4 genes ENSLOCG00000006156 ENSLOCG00000006192 col5a2a ENSLOCG00000010835 col1a2 ENSLOCG00000013046 col1a1b	Compare expression: table \| graph
Opisthokonta	158 genes ENSLOCG00000000005 cnot3b ENSLOCG00000000106 ENSLOCG00000000112 ENSLOCG00000000128 ENSLOCG00000000148 ENSLOCG00000000284 elavl1b ENSLOCG00000000386 ENSLOCG00000000467 sass6 ENSLOCG00000000682 ENSLOCG00000001086 gas8 ENSLOCG00000001442 ENSLOCG00000001450 ENSLOCG00000001464 syvn1 ENSLOCG00000001531 cux1a ENSLOCG00000001758 rnps1 ENSLOCG00000002024 mapk1 ENSLOCG00000002457 plk3 ENSLOCG00000002704 fbxl2 ENSLOCG00000002782 itgbl1 ENSLOCG00000002933 ENSLOCG00000002991 cdk10 ENSLOCG00000003148 cfap45 ENSLOCG00000003476 lrrc74b ENSLOCG00000003638 rps6ka3a ENSLOCG00000003740 rad23ab ENSLOCG00000003853 ENSLOCG00000003932 cdk4 ENSLOCG00000003968 mapk8b ENSLOCG00000004109 cdk2 ENSLOCG00000004124 cdk8 ENSLOCG00000004265 echs1 ENSLOCG00000004279 si:ch211-257p13.3 ENSLOCG00000004378 limk1b ENSLOCG00000004608 ankrd52a ENSLOCG00000004821 limk2 ENSLOCG00000004828 ncl ENSLOCG00000005031 CIRBP ENSLOCG00000005199 lpp ENSLOCG00000005311 cdk9 ENSLOCG00000005457 rps6ka1 ENSLOCG00000005574 pak2b ENSLOCG00000005629 prpf40a ENSLOCG00000005649 PLK1 ENSLOCG00000005712 MORN1 ENSLOCG00000005923 dek ENSLOCG00000005966 celf1 ENSLOCG00000006030 ankrd28b ENSLOCG00000006117 cdk7 ENSLOCG00000006156 ENSLOCG00000006192 col5a2a ENSLOCG00000006202 sfswap ENSLOCG00000006226 cdk11b ENSLOCG00000006476 ENSLOCG00000006555 pak1 ENSLOCG00000006690 cdk1 ENSLOCG00000006855 cwf19l2 ENSLOCG00000006986 hnrnpa3 ENSLOCG00000007035 gsk3bb ENSLOCG00000007136 lrrc34 ENSLOCG00000007371 CIR1 ENSLOCG00000007397 txlng ENSLOCG00000007594 plk2b ENSLOCG00000007618 ENSLOCG00000007647 elavl3 ENSLOCG00000007754 kri1 ENSLOCG00000007877 luc7l ENSLOCG00000007980 rad23aa ENSLOCG00000007987 ccdc173 ENSLOCG00000008032 cfdp1 ENSLOCG00000008407 zyx ENSLOCG00000008452 dnajc9 ENSLOCG00000008824 cog6 ENSLOCG00000008955 CCDC112 ENSLOCG00000008986 col4a2 ENSLOCG00000008999 ppp1r7 ENSLOCG00000009048 sf3b4 ENSLOCG00000009227 ENSLOCG00000009292 cdk5 ENSLOCG00000009331 ENSLOCG00000009363 elavl4 ENSLOCG00000009499 si:dkeyp-75h12.2 ENSLOCG00000009558 ENSLOCG00000009608 lrrc40 ENSLOCG00000009976 rad23b ENSLOCG00000010067 mapk9 ENSLOCG00000010279 ENSLOCG00000010329 ints6 ENSLOCG00000010732 cdk6 ENSLOCG00000010835 col1a2 ENSLOCG00000010936 stk16 ENSLOCG00000010953 luc7l3 ENSLOCG00000010969 tln1 ENSLOCG00000011090 arglu1a ENSLOCG00000011102 mapk13 ENSLOCG00000011129 mapk14b ENSLOCG00000011166 srpk1b ENSLOCG00000011205 vwde ENSLOCG00000011323 ENSLOCG00000011405 tial1 ENSLOCG00000011479 MOK ENSLOCG00000011615 tra2a ENSLOCG00000011854 cdkl1 ENSLOCG00000012003 nfxl1 ENSLOCG00000012028 mapk10 ENSLOCG00000012121 ENSLOCG00000012125 eci2 ENSLOCG00000012243 dyrk3 ENSLOCG00000012301 shoc2 ENSLOCG00000012438 srsf5b ENSLOCG00000012519 srsf3a ENSLOCG00000012526 ENSLOCG00000012564 ENSLOCG00000012575 elavl2 ENSLOCG00000012778 fbxl20 ENSLOCG00000012827 morn4 ENSLOCG00000013046 col1a1b ENSLOCG00000013123 sel1l ENSLOCG00000013519 mns1 ENSLOCG00000013580 ENSLOCG00000013616 zgc:171775 ENSLOCG00000013656 si:ch211-220i18.4 ENSLOCG00000013833 PAK3 ENSLOCG00000013879 alyref ENSLOCG00000014006 rps6ka5 ENSLOCG00000014075 srsf5a ENSLOCG00000014127 fip1l1b ENSLOCG00000014132 prc1a ENSLOCG00000014150 mfap1 ENSLOCG00000014168 ENSLOCG00000014290 lrrc23 ENSLOCG00000014314 srsf7a ENSLOCG00000014446 wasb ENSLOCG00000014740 tln2a ENSLOCG00000014752 cdk20 ENSLOCG00000014919 ENSLOCG00000014981 kctd9b ENSLOCG00000015032 rps6kal ENSLOCG00000015093 ints6l ENSLOCG00000015223 ENSLOCG00000015324 tia1 ENSLOCG00000015487 SRPK2 ENSLOCG00000015496 mapk12b ENSLOCG00000015541 rbm28 ENSLOCG00000015619 ENKD1 ENSLOCG00000015690 CELF2 ENSLOCG00000015771 morn2 ENSLOCG00000015778 srsf7b ENSLOCG00000015863 waslb ENSLOCG00000015982 SEL1L2 ENSLOCG00000015993 ccdc146 ENSLOCG00000016481 sf3b6 ENSLOCG00000016813 rps6ka2 ENSLOCG00000016995 cdk19 ENSLOCG00000017088 smc1b ENSLOCG00000017247 fam184a ENSLOCG00000017612 ENSLOCG00000017721 ENSLOCG00000017744 caiap	Compare expression: table \| graph