Search Genes

Gene : lsm6 - ENSLOCG00000017683 - Lepisosteus oculatus (Spotted gar)

General information

Expressed in ovary and 4 other cell types or tissues.

Gene identifier

ENSLOCG00000017683

Name

lsm6

Description

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]

Organism

Lepisosteus oculatus (Spotted gar)

Synonym(s)

Orthologs

48 orthologs

Paralogs

2 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Neopterygii	11 species Danio rerio (zebrafish) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish)	12 genes ENSDARG00000036995 lsm6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6	Compare expression
Euteleostomi	39 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	43 genes ENSG00000164167 LSM6 ENSMUSG00000031683 Lsm6 ENSDARG00000036995 lsm6 ENSCAFG00000007738 LSM6 ENSFCAG00000003047 LSM6 ENSECAG00000021036 LSM6 ENSSSCG00000035973 LSM6 ENSBTAG00000014060 LSM6 ENSCHIG00000010334 LSM6 ENSCHIG00000012864 ENSCHIG00000024198 ENSOARG00000008509 LSM6 ENSOARG00000011641 ENSCPOG00000032655 LSM6 ENSGALG00000009985 LSM6 ENSMGAG00000003802 LSM6 ENSOANG00000045062 LSM6 ENSCJAG00000002482 LSM6 ENSCATG00000002770 LSM6 ENSMFAG00000033073 LSM6 ENSMMUG00000057637 LSM6 ENSMNEG00000034820 LSM6 ENSPANG00000006552 LSM6 ENSGGOG00000001310 LSM6 ENSPPAG00000037929 LSM6 ENSPTRG00000016488 LSM6 ENSCSAG00000003421 LSM6 108409001 LSM6 ENSRNOG00000030374 LOC100360750 ENSMODG00000039383 LSM6 ENSACAG00000004004 LSM6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6 ENSLACG00000006937 LSM6	Compare expression
Chordata	40 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	44 genes ENSG00000164167 LSM6 ENSMUSG00000031683 Lsm6 ENSDARG00000036995 lsm6 ENSCAFG00000007738 LSM6 ENSFCAG00000003047 LSM6 ENSECAG00000021036 LSM6 ENSSSCG00000035973 LSM6 ENSBTAG00000014060 LSM6 ENSCHIG00000010334 LSM6 ENSCHIG00000012864 ENSCHIG00000024198 ENSOARG00000008509 LSM6 ENSOARG00000011641 ENSCPOG00000032655 LSM6 ENSGALG00000009985 LSM6 ENSMGAG00000003802 LSM6 ENSOANG00000045062 LSM6 ENSCJAG00000002482 LSM6 ENSCATG00000002770 LSM6 ENSMFAG00000033073 LSM6 ENSMMUG00000057637 LSM6 ENSMNEG00000034820 LSM6 ENSPANG00000006552 LSM6 ENSGGOG00000001310 LSM6 ENSPPAG00000037929 LSM6 ENSPTRG00000016488 LSM6 ENSCSAG00000003421 LSM6 108409001 LSM6 ENSRNOG00000030374 LOC100360750 ENSMODG00000039383 LSM6 ENSACAG00000004004 LSM6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6 BL18688 LSM6 ENSLACG00000006937 LSM6	Compare expression
Bilateria	44 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Canis lupus familiaris (dog) Felis catus (cat) Equus caballus (horse) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Gallus gallus (chicken) Meleagris gallopavo (Wild turkey) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Anolis carolinensis (green anole) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	48 genes ENSG00000164167 LSM6 ENSMUSG00000031683 Lsm6 ENSDARG00000036995 lsm6 FBgn0034564 CG9344 WBGene00003080 lsm-6 ENSCAFG00000007738 LSM6 ENSFCAG00000003047 LSM6 ENSECAG00000021036 LSM6 ENSSSCG00000035973 LSM6 ENSBTAG00000014060 LSM6 ENSCHIG00000010334 LSM6 ENSCHIG00000012864 ENSCHIG00000024198 ENSOARG00000008509 LSM6 ENSOARG00000011641 ENSCPOG00000032655 LSM6 ENSGALG00000009985 LSM6 ENSMGAG00000003802 LSM6 ENSOANG00000045062 LSM6 ENSCJAG00000002482 LSM6 ENSCATG00000002770 LSM6 ENSMFAG00000033073 LSM6 ENSMMUG00000057637 LSM6 ENSMNEG00000034820 LSM6 ENSPANG00000006552 LSM6 ENSGGOG00000001310 LSM6 ENSPPAG00000037929 LSM6 ENSPTRG00000016488 LSM6 ENSCSAG00000003421 LSM6 108409001 LSM6 ENSRNOG00000030374 LOC100360750 ENSMODG00000039383 LSM6 ENSACAG00000004004 LSM6 118228430 lsm6 ENSELUG00000014301 LSM6 ENSSSAG00000074461 LSM6 ENSSSAG00000075714 LSM6 ENSGMOG00000015550 lsm6 ENSPREG00000023235 lsm6 ENSACLG00000025621 lsm6 ENSNBRG00000004887 lsm6 ENSSMAG00000004550 lsm6 ENSGACG00000017223 lsm6 ENSNFUG00015002878 LSM6 BL18688 LSM6 ENSLACG00000006937 LSM6 FBgn0081701 Dpse\GA21716 FBgn0183292 Dsim\GD11551	Compare expression

Showing 1 to 4 of 4 entries

Orthology information comes from OMA : ENSLOCG00000017683.

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison	See details
Lepisosteus	1 gene ENSLOCG00000008852 lsm6	Compare expression: table \| graph
Metazoa	2 genes ENSLOCG00000008852 lsm6 ENSLOCG00000015744 snrpf	Compare expression: table \| graph