Search Genes

Gene : HMGB1 - ENSPTRG00000048008 - Pan troglodytes (chimpanzee)

General information

Expressed in fibroblast and 21 other cell types or tissues.

Gene identifier

ENSPTRG00000048008

Name

HMGB1

Description

high mobility group box 1 [Source:NCBI gene (formerly Entrezgene);Acc:452518]

Organism

Pan troglodytes (chimpanzee)

Synonym(s)

ENSPTRP00000074016,ENSPTRT00000082562

Orthologs

50 orthologs

Paralogs

10 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Pan	1 species Pan paniscus (bonobo)	3 genes ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433	Compare expression
Homininae	3 species Homo sapiens (human) Gorilla gorilla (gorilla) Pan paniscus (bonobo)	5 genes ENSG00000189403 HMGB1 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433	Compare expression
Catarrhini	9 species Homo sapiens (human) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Chlorocebus sabaeus (Green monkey)	13 genes ENSG00000189403 HMGB1 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSCSAG00000018600	Compare expression
Primates	10 species Homo sapiens (human) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey)	15 genes ENSG00000189403 HMGB1 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600	Compare expression
Euarchontoglires	12 species Homo sapiens (human) Oryctolagus cuniculus (rabbit) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Rattus norvegicus (rat)	17 genes ENSG00000189403 HMGB1 ENSOCUG00000004133 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600 ENSRNOG00000038478 AABR07029613.1	Compare expression
Tetrapoda	14 species Homo sapiens (human) Oryctolagus cuniculus (rabbit) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog)	21 genes ENSG00000189403 HMGB1 ENSOCUG00000004133 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600 ENSRNOG00000038478 AABR07029613.1 108700261 LOC108700261 108709952 HMG-1 380530 hmgb1.L ENSXETG00000019166 hmgb1	Compare expression
Sarcopterygii	15 species Homo sapiens (human) Oryctolagus cuniculus (rabbit) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Latimeria chalumnae (Coelacanth)	22 genes ENSG00000189403 HMGB1 ENSOCUG00000004133 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600 ENSRNOG00000038478 AABR07029613.1 108700261 LOC108700261 108709952 HMG-1 380530 hmgb1.L ENSXETG00000019166 hmgb1 ENSLACG00000006701 HMGB1	Compare expression
Euteleostomi	28 species Homo sapiens (human) Danio rerio (zebrafish) Oryctolagus cuniculus (rabbit) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	48 genes ENSG00000189403 HMGB1 ENSDARG00000030479 hmgb1b ENSDARG00000099175 hmgb1a ENSDARG00000114353 hmgb1a ENSOCUG00000004133 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600 ENSRNOG00000038478 AABR07029613.1 108700261 LOC108700261 108709952 HMG-1 380530 hmgb1.L ENSXETG00000019166 hmgb1 ENSLOCG00000000187 hmgb1b 118236432 LOC118236432 ENSELUG00000007158 hmgb1b ENSELUG00000034296 hmgb1a ENSSSAG00000000847 hmgb1 ENSSSAG00000040208 HMGB1 ENSSSAG00000070305 HMGB1 ENSGMOG00000010657 hmgb1b ENSGMOG00000019231 HMGB1 ENSPREG00000010391 hmgb1a ENSPREG00000012015 hmgb1b ENSORLG00000003400 hmgb1a ENSORLG00000003951 hmgb1b ENSACLG00000000621 hmgb1b ENSACLG00000004323 hmgb1a ENSNBRG00000014226 hmgb1a ENSNBRG00000023628 hmgb1b ENSSMAG00000004055 hmgb1a ENSSMAG00000006047 hmgb1b ENSGACG00000011447 hmgb1b ENSGACG00000020545 hmgb1a ENSNFUG00015002796 HMGB1B ENSNFUG00015013607 HMGB1A ENSLACG00000006701 HMGB1	Compare expression
Chordata	29 species Homo sapiens (human) Danio rerio (zebrafish) Oryctolagus cuniculus (rabbit) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	49 genes ENSG00000189403 HMGB1 ENSDARG00000030479 hmgb1b ENSDARG00000099175 hmgb1a ENSDARG00000114353 hmgb1a ENSOCUG00000004133 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600 ENSRNOG00000038478 AABR07029613.1 108700261 LOC108700261 108709952 HMG-1 380530 hmgb1.L ENSXETG00000019166 hmgb1 ENSLOCG00000000187 hmgb1b 118236432 LOC118236432 ENSELUG00000007158 hmgb1b ENSELUG00000034296 hmgb1a ENSSSAG00000000847 hmgb1 ENSSSAG00000040208 HMGB1 ENSSSAG00000070305 HMGB1 ENSGMOG00000010657 hmgb1b ENSGMOG00000019231 HMGB1 ENSPREG00000010391 hmgb1a ENSPREG00000012015 hmgb1b ENSORLG00000003400 hmgb1a ENSORLG00000003951 hmgb1b ENSACLG00000000621 hmgb1b ENSACLG00000004323 hmgb1a ENSNBRG00000014226 hmgb1a ENSNBRG00000023628 hmgb1b ENSSMAG00000004055 hmgb1a ENSSMAG00000006047 hmgb1b ENSGACG00000011447 hmgb1b ENSGACG00000020545 hmgb1a ENSNFUG00015002796 HMGB1B ENSNFUG00015013607 HMGB1A BL11411 HMGB1 ENSLACG00000006701 HMGB1	Compare expression
Bilateria	30 species Homo sapiens (human) Danio rerio (zebrafish) Caenorhabditis elegans (nematode) Oryctolagus cuniculus (rabbit) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Rattus norvegicus (rat) Xenopus laevis (African clawed frog) Xenopus tropicalis (western clawed frog) Lepisosteus oculatus (Spotted gar) Anguilla anguilla (European freshwater eel) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	50 genes ENSG00000189403 HMGB1 ENSDARG00000030479 hmgb1b ENSDARG00000099175 hmgb1a ENSDARG00000114353 hmgb1a WBGene00001972 hmg-1.2 ENSOCUG00000004133 ENSCATG00000017216 HMGB1 ENSMFAG00000030905 HMGB1 ENSMMUG00000019832 ENSMMUG00000046615 HMGB1 ENSMNEG00000028891 HMGB1 ENSPANG00000007200 HMGB1 ENSPANG00000011105 ENSGGOG00000026764 HMGB1 ENSPPAG00000012676 ENSPPAG00000030148 HMGB1 ENSPPAG00000039433 ENSMICG00000006213 ENSMICG00000007144 HMGB1 ENSCSAG00000018600 ENSRNOG00000038478 AABR07029613.1 108700261 LOC108700261 108709952 HMG-1 380530 hmgb1.L ENSXETG00000019166 hmgb1 ENSLOCG00000000187 hmgb1b 118236432 LOC118236432 ENSELUG00000007158 hmgb1b ENSELUG00000034296 hmgb1a ENSSSAG00000000847 hmgb1 ENSSSAG00000040208 HMGB1 ENSSSAG00000070305 HMGB1 ENSGMOG00000010657 hmgb1b ENSGMOG00000019231 HMGB1 ENSPREG00000010391 hmgb1a ENSPREG00000012015 hmgb1b ENSORLG00000003400 hmgb1a ENSORLG00000003951 hmgb1b ENSACLG00000000621 hmgb1b ENSACLG00000004323 hmgb1a ENSNBRG00000014226 hmgb1a ENSNBRG00000023628 hmgb1b ENSSMAG00000004055 hmgb1a ENSSMAG00000006047 hmgb1b ENSGACG00000011447 hmgb1b ENSGACG00000020545 hmgb1a ENSNFUG00015002796 HMGB1B ENSNFUG00015013607 HMGB1A BL11411 HMGB1 ENSLACG00000006701 HMGB1	Compare expression

Showing 1 to 10 of 10 entries

Orthology information comes from OMA : ENSPTRG00000048008.

Paralogs (same species)

Filter:

Taxon Name	Gene(s)	Expression comparison
Pan	2 genes ENSPTRG00000047359 ENSPTRG00000048984	Compare expression: table \| graph
Primates	4 genes ENSPTRG00000044893 LOC107970066 ENSPTRG00000047359 ENSPTRG00000048984 ENSPTRG00000050599	Compare expression: table \| graph
Euteleostomi	5 genes ENSPTRG00000044268 ENSPTRG00000044893 LOC107970066 ENSPTRG00000047359 ENSPTRG00000048984 ENSPTRG00000050599	Compare expression: table \| graph
Vertebrata	9 genes ENSPTRG00000016597 HMGB2 ENSPTRG00000022371 HMGB3 ENSPTRG00000044268 ENSPTRG00000044893 LOC107970066 ENSPTRG00000047359 ENSPTRG00000048984 ENSPTRG00000049874 ENSPTRG00000050599 ENSPTRG00000051338 LOC471771	Compare expression: table \| graph
Deuterostomia	10 genes ENSPTRG00000016597 HMGB2 ENSPTRG00000022371 HMGB3 ENSPTRG00000044268 ENSPTRG00000044893 LOC107970066 ENSPTRG00000047359 ENSPTRG00000048984 ENSPTRG00000049874 ENSPTRG00000050599 ENSPTRG00000051338 LOC471771 ENSPTRG00000051856	Compare expression: table \| graph

Showing 1 to 5 of 5 entries

Paralogy information comes from OMA : ENSPTRG00000048008.

Cross-references

Ensembl

ENSPTRG00000048008 (HMGB1),ENSPTRP00000074016,ENSPTRT00000082562

RefSeq

XM_001140491.5,XM_003952381.3,XM_509611.5,XP_001140491.1,XP_003952430.1,XP_509611.1

EMBL

AC156808,NBAG03000252

UniProtKB/TrEMBL

A0A2I3SBZ9,A0A2J8MLR6,A0A2J8MLR6_PANTR,A0A2J8MLU3,A0A2J8MLU3_PANTR