Salmo salar

Gene : RPS29 - ENSSSAG00000065477 - Salmo salar (Atlantic salmon)

General information

Gene identifier

ENSSSAG00000065477

Name

RPS29

Description

ribosomal protein S29 [Source:HGNC Symbol;Acc:HGNC:10419]

Synonym(s)

Orthologs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0006866terminal part of digestive tract99.91<= 1.00e-14See source data
RSCAIE
UBERON:0009120gill filament99.89<= 1.00e-14See source data
RSCAIE
UBERON:0005870olfactory pit99.88<= 1.00e-14See source data
RSCAIE
UBERON:0000007pituitary gland99.84<= 1.00e-14See source data
RSCAIE
UBERON:0007132head kidney99.82<= 1.00e-14See source data
RSCAIE
UBERON:0007021sexually immature organism99.80<= 1.00e-14See source data
RSCAIE
UBERON:0000473testis99.75<= 1.00e-14See source data
RSCAIE
UBERON:0000014zone of skin99.74<= 1.00e-14See source data
RSCAIE
UBERON:0000992ovary99.70<= 1.00e-14See source data
RSCAIE
UBERON:0002106spleen99.69<= 1.00e-14See source data
RSCAIE
UBERON:0001046hindgut99.67<= 1.00e-14See source data
RSCAIE
UBERON:0000970eye99.66<= 1.00e-14See source data
RSCAIE
UBERON:2005272immature gonad99.62<= 1.00e-14See source data
RSCAIE
UBERON:0002385muscle tissue99.56<= 1.00e-14See source data
RSCAIE
UBERON:0002328notochord99.53<= 1.00e-14See source data
RSCAIE
UBERON:0000160intestine99.51<= 1.00e-14See source data
RSCAIE
UBERON:0000080mesonephros99.51<= 1.00e-14See source data
RSCAIE
UBERON:0002116ileum99.49<= 1.00e-14See source data
RSCAIE
UBERON:0000019camera-type eye99.46<= 1.00e-14See source data
RSCAIE
UBERON:0006908fast muscle tissue99.45<= 1.00e-14See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Protacanthopterygii

1 species

Esox lucius (Northern pike)

1 gene

Compare expression
Euteleosteomorpha

8 species

Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Clupeocephala

10 species

Danio rerio (zebrafish)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Teleostei

11 species

Danio rerio (zebrafish)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Neopterygii

12 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Euteleostomi

38 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)


Ovis aries (Sheep)


Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)


Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)

Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)

Monodelphis domestica (opossum)



Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

56 genes

Compare expression
Bilateria

42 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)


Ovis aries (Sheep)


Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Cercocebus atys (Sooty mangabey)


Macaca fascicularis (Crab-eating macaque)


Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)

Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)

Monodelphis domestica (opossum)



Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()
Drosophila simulans ()

60 genes

Compare expression
Orthology information comes from OMA : ENSSSAG00000065477.

Cross-references

Ensembl

HGNC

HGNC:10419 (RPS29)