Salmo salar

Gene : MED30 - ENSSSAG00000077408 - Salmo salar (Atlantic salmon)

General information

Gene identifier

ENSSSAG00000077408

Name

MED30

Description

mediator of RNA polymerase II transcription subunit 30 [Source:NCBI gene;Acc:106588506]

Synonym(s)

loc106588506

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001968semen91.792.56e-4See source data
RSCAIE
UBERON:0001046hindgut90.301.67e-7See source data
RSCAIE
UBERON:0002116ileum90.052.78e-8See source data
RSCAIE
UBERON:0002328notochord89.741.84e-7See source data
RSCAIE
UBERON:0000019camera-type eye87.442.03e-6See source data
RSCAIE
UBERON:0006866terminal part of digestive tract87.092.38e-7See source data
RSCAIE
UBERON:0001045midgut86.646.69e-7See source data
RSCAIE
UBERON:0000007pituitary gland85.011.05e-6See source data
RSCAIE
UBERON:0000473testis84.461.21e-5See source data
RSCAIE
UBERON:2005272immature gonad84.182.96e-6See source data
RSCAIE
UBERON:0007132head kidney83.655.61e-6See source data
RSCAIE
UBERON:0002385muscle tissue81.957.97e-6See source data
RSCAIE
UBERON:0000080mesonephros80.223.93e-6See source data
RSCAIE
UBERON:0006908fast muscle tissue80.095.89e-5See source data
RSCAIE
UBERON:0002107liver80.033.02e-5See source data
RSCAIE
UBERON:4300174actinopterygian pyloric caecum79.333.64e-6See source data
RSCAIE
UBERON:0007021sexually immature organism79.172.78e-8See source data
RSCAIE
UBERON:0000948heart77.764.21e-5See source data
RSCAIE
UBERON:0002106spleen77.351.64e-5See source data
RSCAIE
UBERON:0000014zone of skin77.095.56e-6See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Protacanthopterygii

1 species

Esox lucius (Northern pike)

1 gene

Compare expression
Euteleosteomorpha

6 species

Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Clupeocephala

8 species

Danio rerio (zebrafish)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Teleostei

9 species

Danio rerio (zebrafish)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Neopterygii

10 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Euteleostomi

42 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)

43 genes

Compare expression
Chordata

43 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

44 genes

Compare expression
Orthology information comes from OMA : ENSSSAG00000077408.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Protacanthopterygii

1 gene

Compare expression
VertebrataCompare expression
Paralogy information comes from OMA : ENSSSAG00000077408.

Cross-references

Ensembl

UniProtKB/TrEMBL