Gene : - ENSSSCG00000040412 - Sus scrofa (pig)
General information
Gene identifier
ENSSSCG00000040412
Name
Description
Organism
Synonym(s)
Orthologs
Paralogs
Expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000473testis | 86.71 | 1.63e-8 | See source data | |
| UBERON:0011219longissimus lumborum muscle | 55.45 | 6.66e-4 | See source data | |
| UBERON:0002385muscle tissue | 54.49 | 2.57e-5 | See source data | |
| UBERON:0001134skeletal muscle tissue | 53.28 | 0.004 | See source data | |
| CL:0000501granulosa cell | 45.83 | 0.003 | See source data | |
| UBERON:0001298psoas major muscle | 45.41 | 0.002 | See source data | |
| UBERON:0001896medulla oblongata | 44.39 | 0.014 | See source data | |
| UBERON:0001401longissimus thoracis muscle | 43.27 | 2.26e-6 | See source data | |
| UBERON:0000995uterus | 41.63 | 3.95e-6 | See source data | |
| UBERON:0001870frontal cortex | 41.27 | 8.73e-4 | See source data | |
| UBERON:0001013adipose tissue | 39.15 | 0.002 | See source data | |
| UBERON:0002190subcutaneous adipose tissue | 38.35 | 0.004 | See source data | |
| UBERON:0000451prefrontal cortex | 38.20 | 0.002 | See source data | |
| UBERON:0001381semimembranosus muscle | 38.09 | 0.007 | See source data | |
| UBERON:0001876amygdala | 37.42 | 0.04 | See source data | |
| UBERON:0000988pons | 36.72 | 0.015 | See source data | |
| UBERON:0005418hindlimb bud | 35.65 | 0.007 | See source data | |
| UBERON:0005417forelimb bud | 35.62 | 0.039 | See source data | |
| UBERON:0001897dorsal plus ventral thalamus | 33.84 | 0.039 | See source data | |
| CL:0000023oocyte | 33.79 | 0.037 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000992ovary | 19.25 | 0.321 | See source data | |
| UBERON:0000029lymph node | 20.37 | 0.989 | See source data | |
| UBERON:0002084heart left ventricle | 20.82 | 0.794 | See source data | |
| UBERON:0001155colon | 21.25 | 0.967 | See source data | |
| UBERON:0002509mesenteric lymph node | 22.18 | 0.565 | See source data | |
| UBERON:0002372tonsil | 23.18 | 0.571 | See source data | |
| UBERON:0000945stomach | 23.56 | 0.768 | See source data | |
| UBERON:0002037cerebellum | 23.95 | 1 | See source data | |
| UBERON:0001153caecum | 24.36 | 0.672 | See source data | |
| UBERON:0001301epididymis | 24.41 | 0.27 | See source data | |
| UBERON:0000007pituitary gland | 24.82 | 0.486 | See source data | |
| UBERON:0000989penis | 25.89 | 0.293 | See source data | |
| UBERON:0010533metanephros cortex | 27.94 | 0.304 | See source data | |
| UBERON:0002114duodenum | 28.05 | 0.304 | See source data | |
| UBERON:0003688omentum | 29.63 | 0.26 | See source data | |
| UBERON:0002116ileum | 30.61 | 0.243 | See source data | |
| UBERON:0002336corpus callosum | 32.51 | 0.105 | See source data | |
| UBERON:0000178blood | 35.28 | 0.144 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Laurasiatheria | 4 species | 4 genes | Compare expression | |
| Boreoeutheria | 18 species | 18 genes | Compare expression | |
| Theria | 19 species | 19 genes | Compare expression | |
| Mammalia | 20 species | 20 genes | Compare expression | |
| Amniota | 23 species | 23 genes | Compare expression | |
| Tetrapoda | 25 species | 26 genes | Compare expression | |
| Sarcopterygii | 26 species | 28 genes | Compare expression | |
| Euteleostomi | 40 species | 55 genes | Compare expression | |
| Chordata | 41 species | 56 genes | Compare expression | |
| Bilateria | 45 species | 62 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Artiodactyla | 1 gene | Compare expression |
Cross-references
Ensembl