Search Genes

Gene : smc1a - ENSXETG00000024747 - Xenopus tropicalis (western clawed frog)

General information

Expressed in 4-cell stage embryo and 18 other cell types or tissues.

Gene identifier

ENSXETG00000024747

Name

smc1a

Description

structural maintenance of chromosomes 1A [Source:Xenbase;Acc:XB-GENE-972620]

Organism

Xenopus tropicalis (western clawed frog)

Synonym(s)

Orthologs

47 orthologs

Paralogs

139 paralogs

Source data

Retrieve all processed expression values for that gene

Expression graph

80%

Expression table

80%

Reported absence of expression

80%

Orthologs

Filter:

Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Xenopus	1 species Xenopus laevis (African clawed frog)	2 genes 108699983 smc1a.S 380182 smc1a.L	Compare expression
Tetrapoda	25 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog)	26 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L	Compare expression
Sarcopterygii	26 species Homo sapiens (human) Mus musculus (mouse) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Latimeria chalumnae (Coelacanth)	27 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L ENSLACG00000000861 SMC1A	Compare expression
Euteleostomi	39 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Latimeria chalumnae (Coelacanth)	42 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSDARG00000055754 smc1a ENSDARG00000058203 smc1al ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al ENSLACG00000000861 SMC1A	Compare expression
Chordata	40 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth)	43 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSDARG00000055754 smc1a ENSDARG00000058203 smc1al ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al BL08495 ENSG00000269384 ENSLACG00000000861 SMC1A	Compare expression
Bilateria	44 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Canis lupus familiaris (dog) Felis catus (cat) Sus scrofa (pig) Bos taurus (cattle) Capra hircus (Goat) Ovis aries (Sheep) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Callithrix jacchus (White-tufted-ear marmoset) Cercocebus atys (Sooty mangabey) Macaca fascicularis (Crab-eating macaque) Macaca mulatta (macaque) Macaca nemestrina (Pig-tailed macaque) Papio anubis (Olive baboon) Gorilla gorilla (gorilla) Pan paniscus (bonobo) Pan troglodytes (chimpanzee) Microcebus murinus (Gray mouse lemur) Chlorocebus sabaeus (Green monkey) Manis javanica (Malayan pangolin) Rattus norvegicus (rat) Monodelphis domestica (opossum) Xenopus laevis (African clawed frog) Anguilla anguilla (European freshwater eel) Astyanax mexicanus (Blind cave fish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Gadus morhua (Atlantic cod) Poecilia reticulata (Guppy) Oryzias latipes (Japanese rice fish) Astatotilapia calliptera (Eastern happy) Neolamprologus brichardi (Fairy cichlid) Scophthalmus maximus (Turbot) Gasterosteus aculeatus (Three-spined stickleback) Nothobranchius furzeri (Turquoise killifish) Branchiostoma lanceolatum (Common lancelet) Latimeria chalumnae (Coelacanth) Drosophila pseudoobscura () Drosophila simulans ()	47 genes ENSG00000072501 SMC1A ENSMUSG00000041133 Smc1a ENSDARG00000055754 smc1a ENSDARG00000058203 smc1al FBgn0040283 SMC1 WBGene00001860 him-1 ENSCAFG00000016241 SMC1A ENSFCAG00000013897 SMC1A ENSSSCG00000012325 SMC1A ENSBTAG00000017761 SMC1A ENSCHIG00000008648 SMC1A ENSOARG00000008581 SMC1A ENSCPOG00000009577 SMC1A ENSOANG00000009211 SMC1A ENSCJAG00000005985 SMC1A ENSCATG00000038498 SMC1A ENSMFAG00000003859 SMC1A ENSMMUG00000009293 SMC1A ENSMNEG00000029158 SMC1A ENSPANG00000015373 SMC1A ENSGGOG00000004321 SMC1A ENSPPAG00000042217 SMC1A ENSPTRG00000021927 SMC1A ENSMICG00000014444 SMC1A ENSCSAG00000012563 SMC1A 108407870 SMC1A ENSRNOG00000003139 Smc1a ENSMODG00000016607 SMC1A 108699983 smc1a.S 380182 smc1a.L 118207774 smc1a ENSAMXG00000013136 smc1a ENSELUG00000009461 smc1al ENSSSAG00000006452 SMC1A ENSSSAG00000064516 smc1al ENSGMOG00000008344 smc1al ENSPREG00000021702 smc1al ENSORLG00000007360 smc1al ENSACLG00000004712 smc1al ENSNBRG00000015949 smc1al ENSSMAG00000002013 smc1al ENSGACG00000008848 smc1al ENSNFUG00015006519 smc1al BL08495 ENSG00000269384 ENSLACG00000000861 SMC1A FBgn0079325 Dpse\GA19328 FBgn0192517 Dsim\GD21062	Compare expression

Showing 1 to 6 of 6 entries

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison	See details
Metazoa	1 gene ENSXETG00000003064 smc1b	Compare expression: table \| graph
Opisthokonta	139 genes ENSXETG00000000185 cdk10 ENSXETG00000000229 luc7l2 ENSXETG00000000409 XB956263 [provisional:mapk12] ENSXETG00000000426 srpk1 ENSXETG00000000436 mapk12 ENSXETG00000000438 mapk14 ENSXETG00000000481 cdk7 ENSXETG00000000580 prpf40b ENSXETG00000000735 srpk2 ENSXETG00000000848 echs1 ENSXETG00000001701 srsf3 ENSXETG00000001806 hnrnpa3 ENSXETG00000002211 srsf5 ENSXETG00000002324 tcerg1 ENSXETG00000002635 col4a2 ENSXETG00000003064 smc1b ENSXETG00000003123 cdk1 ENSXETG00000003166 cnot3 ENSXETG00000003281 cirbp ENSXETG00000003374 col1a1 ENSXETG00000004179 limk2 ENSXETG00000004577 tlr13 ENSXETG00000005300 rusc2 ENSXETG00000005391 alyref ENSXETG00000005476 cux1 ENSXETG00000005751 rad23b ENSXETG00000006199 mapk10 ENSXETG00000007397 tra2a ENSXETG00000007481 dnajc9 ENSXETG00000007511 tra2b ENSXETG00000008111 cfap45 ENSXETG00000008514 tia1 ENSXETG00000008680 elavl4 ENSXETG00000008752 elavl1 ENSXETG00000008989 ankrd28 ENSXETG00000009044 celf1 ENSXETG00000009182 sass6 ENSXETG00000009217 lrrc34 ENSXETG00000009271 rbm28 ENSXETG00000009350 sfswap ENSXETG00000009444 cdk2 ENSXETG00000009503 ankrd52 ENSXETG00000009517 ncl ENSXETG00000009717 tln2 ENSXETG00000009787 cdk8 ENSXETG00000009836 nfxl1 ENSXETG00000010038 sel1l ENSXETG00000010285 rps6ka3 ENSXETG00000010324 limk1 ENSXETG00000010344 plk1 ENSXETG00000010655 col2a1 ENSXETG00000010783 col3a1 ENSXETG00000010784 gal3st2 ENSXETG00000010835 alg6 ENSXETG00000011038 sf3b4 ENSXETG00000011062 luc7l3 ENSXETG00000011562 luc7l ENSXETG00000011646 kri1 ENSXETG00000011679 fip1l1 ENSXETG00000011808 pak2 ENSXETG00000012072 gsk3a ENSXETG00000012163 ppp1r7 ENSXETG00000012170 hnrnpa2b1 ENSXETG00000012289 rps6ka1 ENSXETG00000012372 lrrc40 ENSXETG00000012421 pak3 ENSXETG00000012850 lpp ENSXETG00000013202 sass6.2 ENSXETG00000013590 plk3 ENSXETG00000014181 dek ENSXETG00000014506 rps6ka6 ENSXETG00000014649 tln1 ENSXETG00000015449 prc1 ENSXETG00000015470 mfap1 ENSXETG00000015620 enkd1 ENSXETG00000016035 cog6 ENSXETG00000016556 mns1 ENSXETG00000016741 elavl3 ENSXETG00000017937 srsf5a ENSXETG00000018066 eci2 ENSXETG00000018081 prc1.2 ENSXETG00000018483 cwf19l2 ENSXETG00000018529 cdk6 ENSXETG00000018576 mapk1 ENSXETG00000018823 stk36 ENSXETG00000018847 plk2 ENSXETG00000018928 ccdc173 ENSXETG00000019290 stk16 ENSXETG00000019606 cdk11b ENSXETG00000019709 cdkl1 ENSXETG00000019733 ccdc146 ENSXETG00000019762 ints6l ENSXETG00000019848 gas8 ENSXETG00000020318 col1a2 ENSXETG00000020665 itgbl1 ENSXETG00000020719 ints6 ENSXETG00000021277 hnrnpa1 ENSXETG00000021324 cdk19 ENSXETG00000021614 lrrc74b ENSXETG00000021691 mapk8 ENSXETG00000021713 prpf40a ENSXETG00000021992 celf2 ENSXETG00000022129 wasl ENSXETG00000022254 mapk11 ENSXETG00000022616 fam184a ENSXETG00000023173 srpk3 ENSXETG00000023327 syvn1 ENSXETG00000023700 fbxl20 ENSXETG00000023718 shoc2 ENSXETG00000023919 phb2 ENSXETG00000023923 lrrc23 ENSXETG00000024439 rnps1 ENSXETG00000024742 cdk9 ENSXETG00000024935 XB5772073 [provisional:srpk1] ENSXETG00000025300 srsf7 ENSXETG00000025471 arglu1 ENSXETG00000025994 rps6ka2 ENSXETG00000027995 cfdp1 ENSXETG00000030042 tube1 ENSXETG00000030343 slirp ENSXETG00000031391 kifc2 ENSXETG00000031480 grsf1 ENSXETG00000031843 ssc4d ENSXETG00000031912 ltb4r2 ENSXETG00000031922 mapk13 ENSXETG00000032970 ttc7b ENSXETG00000032994 XB5969698 [provisional:lamb4] ENSXETG00000034350 kctd9 ENSXETG00000035239 ccdc151 ENSXETG00000035293 ttc8 ENSXETG00000035980 echdc3 ENSXETG00000036152 cir1 ENSXETG00000036156 pan3 ENSXETG00000037228 XB1001290 ENSXETG00000038226 slc39a14 ENSXETG00000038617 trerf1 ENSXETG00000039811 LOC100492152 ENSXETG00000040575 ppp3cb ENSXETG00000041359 rarb	Compare expression: table \| graph

Showing 1 to 2 of 2 entries

Cross-references

Ensembl

ENSXETG00000024747 (smc1a)

Xenbase

XB-GENE-972620 (smc1a)

UniProtKB/TrEMBL

A0A6I8QZH2,A0A6I8QZH2_XENTR,A0A6I8STG1,A0A6I8STG1_XENTR