Drosophila pseudoobscura

Gene : Dpse\GA28835 - FBgn0250194 - Drosophila pseudoobscura

General information

Gene identifier

FBgn0250194

Name

Dpse\GA28835

Description

Synonym(s)

Dpse_GA28835,FBtr0289028,FBpp0287466

Orthologs

Paralogs

Expression graph

Dpse\GA28835Dpse\GA28835[-]anatomical entity[+]reproductive system[+]multicellular organismExpression score020406080100Not expressedNo data
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Expression table

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000079male reproductive system94.923.45e-9See source data
RSCAIE
UBERON:0007023adult organism53.698.05e-12See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:6003007insect adult head12.381See source data
RSCAIE
UBERON:0000474female reproductive system17.030.886See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Sophophora

2 genes

FBgn0031728 Hsp60C
FBgn0194741 Dsim\GD23355
Compare expression
Ecdysozoa

3 genes

FBgn0031728 Hsp60C
WBGene00002025 hsp-60
FBgn0194741 Dsim\GD23355
Compare expression
Bilateria

48 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)


Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)

Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)





Macaca fascicularis (Crab-eating macaque)



Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)


Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)



Pan paniscus (bonobo)



Pan troglodytes (chimpanzee)




Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)

Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Drosophila simulans ()

75 genes

ENSG00000144381 HSPD1
ENSMUSG00000025980 Hspd1
ENSDARG00000056160 hspd1
FBgn0031728 Hsp60C
WBGene00002025 hsp-60
ENSCAFG00000010865 HSPD1
ENSCAFG00000030272
ENSCAFG00000030681
ENSFCAG00000025949 HSPD1
ENSECAG00000008968 HSPD1
ENSSSCG00000016077 HSPD1
ENSBTAG00000012586 HSPD1
ENSBTAG00000047441 HSPD1
ENSCHIG00000004382 HSPD1
ENSOARG00000015476 HSPD1
ENSOCUG00000012736 HSPD1
ENSCPOG00000002588 HSPD1
ENSGALG00000008094 HSPD1
ENSMGAG00000007073 HSPD1
ENSOANG00000010414 HSPD1
ENSCJAG00000003990 HSPD1
ENSCATG00000032435
ENSCATG00000034430
ENSCATG00000035488
ENSCATG00000039348
ENSCATG00000044175 HSPD1
ENSCATG00000045349
ENSMFAG00000003390
ENSMFAG00000033000 HSPD1
ENSMFAG00000036512
ENSMFAG00000039989
ENSMMUG00000007216 LOC693438
ENSMMUG00000010489 HSPD1
ENSMNEG00000030798
ENSMNEG00000031612
ENSMNEG00000034702
ENSPANG00000029555
ENSGGOG00000008267 HSPD1
ENSGGOG00000038059
ENSGGOG00000038467
ENSGGOG00000042033
ENSPPAG00000032170
ENSPPAG00000034777
ENSPPAG00000038858 HSPD1
ENSPPAG00000043346
ENSPTRG00000043291 LOC467037
ENSPTRG00000044665 HSPD1
ENSPTRG00000045315
ENSPTRG00000049884
ENSPTRG00000052601
ENSCSAG00000011463 HSPD1
108401483 HSPD1
ENSRNOG00000014525 Hspd1
ENSMODG00000012289 HSPD1
ENSMODG00000046554
379341 hspd1.L
399217 hspd1.S
ENSXETG00000007509 hspd1
ENSACAG00000009505 HSPD1
ENSLOCG00000003937 hspd1
118222886 hspd1
ENSAMXG00000002207 hspd1
ENSELUG00000005904 hspd1
ENSSSAG00000053792 hspd1
ENSSSAG00000081432 hspd1
ENSGMOG00000006801 hspd1
ENSPREG00000019620 hspd1
ENSORLG00000020874 hspd1
ENSACLG00000023632 hspd1
ENSNBRG00000015906 hspd1
ENSSMAG00000014018 hspd1
ENSGACG00000008860 hspd1
ENSNFUG00015004867 HSPD1
ENSLACG00000015296 HSPD1
FBgn0194741 Dsim\GD23355
Compare expression
Orthology information comes from OMA : FBgn0250194.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Hexapoda

1 gene

FBgn0244087 Dpse\GA22684

Compare expression: table | graph

Metazoa

2 genes

FBgn0244087 Dpse\GA22684
FBgn0247215 Dpse\GA25838

Compare expression: table | graph

Eukaryota

10 genes

FBgn0078830 Dpse\GA18830
FBgn0078949 Dpse\GA18950
FBgn0080042 Dpse\GA20046
FBgn0081000 Dpse\GA21011
FBgn0081066 Dpse\GA21078
FBgn0081435 Dpse\GA21448
FBgn0244087 Dpse\GA22684
FBgn0247215 Dpse\GA25838
FBgn0247559 Dpse\GA26183
FBgn0248988 Dpse\GA27623

Compare expression: table | graph

Paralogy information comes from OMA : FBgn0250194.

Cross-references

EnsemblMetazoa

FlyBase

FBgn0250194 (Dpse\GA28835)

UniProtKB/TrEMBL