Caenorhabditis elegans

Gene : rab-39 - WBGene00004286 - Caenorhabditis elegans (nematode)

General information

Gene identifier

WBGene00004286

Name

rab-39

Description

RAB family [Source:UniProtKB/TrEMBL;Acc:Q18969]

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002548larva83.171.20e-9See source data
RSCAIE
WBbt:0005784germ line (C elegans)82.280.002See source data
RSCAIE
UBERON:0007023adult organism79.657.38e-12See source data
RSCAIE
UBERON:0000922embryo76.001.83e-7See source data
RSCAIE
WBbt:0005451pharyngeal muscle cell (C elegans)70.821.25e-5See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Ecdysozoa

3 genes

FBgn0029959 Rab39
FBgn0071493 Dpse\GA11442
FBgn0188439 Dsim\GD16855
Compare expression
Bilateria

47 species

Homo sapiens (human)

Mus musculus (mouse)

Danio rerio (zebrafish)

Drosophila melanogaster (fruit fly)
Canis lupus familiaris (dog)
Felis catus (cat)

Equus caballus (horse)

Sus scrofa (pig)

Bos taurus (cattle)

Capra hircus (Goat)

Ovis aries (Sheep)

Oryctolagus cuniculus (rabbit)

Cavia porcellus (guinea pig)

Gallus gallus (chicken)

Meleagris gallopavo (Wild turkey)

Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)

Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)

Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)

Pan paniscus (bonobo)

Pan troglodytes (chimpanzee)


Chlorocebus sabaeus (Green monkey)

Manis javanica (Malayan pangolin)

Monodelphis domestica (opossum)


Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)

Anguilla anguilla (European freshwater eel)


Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)



Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)

Astatotilapia calliptera (Eastern happy)


Neolamprologus brichardi (Fairy cichlid)

Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)

Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

Drosophila pseudoobscura ()
Drosophila simulans ()

89 genes

ENSG00000155961 RAB39B
ENSG00000179331 RAB39A
ENSMUSG00000031202 Rab39b
ENSMUSG00000055069 Rab39
ENSDARG00000019312 rab39ba
ENSDARG00000036501 rab39bb
FBgn0029959 Rab39
ENSCAFG00000019640 RAB39B
ENSFCAG00000032339 RAB39A
ENSFCAG00000038920 RAB39B
ENSECAG00000007380 RAB39B
ENSECAG00000024148 RAB39A
ENSSSCG00000024233 RAB39B
ENSSSCG00000031723 RAB39A
ENSBTAG00000018246 RAB39A
ENSBTAG00000019779 RAB39B
ENSCHIG00000000158 RAB39B
ENSCHIG00000019858 RAB39A
ENSOARG00000003682 RAB39B
ENSOARG00000010863 RAB39A
ENSOCUG00000004254 RAB39B
ENSOCUG00000021112 RAB39A
ENSCPOG00000039524 RAB39B
ENSCPOG00000040219 RAB39A
ENSGALG00000017166 RAB39A
ENSGALG00000040784 RAB39B
ENSMGAG00000015613 RAB39A
ENSMGAG00000015819 RAB39B
ENSOANG00000041634 RAB39B
ENSCJAG00000010058 RAB39A
ENSCJAG00000064579 RAB39B
ENSCATG00000020707 RAB39A
ENSCATG00000034919 RAB39B
ENSMFAG00000036188 RAB39B
ENSMFAG00000043510 RAB39A
ENSMMUG00000052526 RAB39A
ENSMMUG00000059069 RAB39B
ENSMNEG00000030607 RAB39B
ENSMNEG00000037136 RAB39A
ENSPANG00000008960 RAB39B
ENSGGOG00000005567 RAB39B
ENSGGOG00000014745
ENSPPAG00000041186 RAB39B
ENSPPAG00000043361 RAB39A
ENSPTRG00000042083 RAB39B
ENSPTRG00000048400 RAB39B
ENSPTRG00000049354 RAB39A
ENSCSAG00000003008 RAB39A
ENSCSAG00000006507 RAB39B
108403105 RAB39B
108406736 RAB39A
ENSMODG00000014670 RAB39A
ENSMODG00000016498 RAB39B
ENSMODG00000025173
108698392 rab39b.L
108700095 rab39b.S
ENSXETG00000032443 nr6a1
ENSACAG00000006243 RAB39A
ENSLOCG00000006748
ENSLOCG00000014927 rab39bb
118224363 rab39bb
118236231 LOC118236231
118236279 LOC118236279
ENSAMXG00000003717 RAB39B
ENSELUG00000005304 rab39bb
ENSELUG00000013957 RAB39B
ENSSSAG00000040974 RAB39B
ENSSSAG00000067507 RAB39B
ENSSSAG00000069306 RAB39B
ENSSSAG00000070849 RAB39B
ENSGMOG00000008450
ENSGMOG00000010808 RAB39B
ENSPREG00000007129 RAB39B
ENSPREG00000009597 RAB39B
ENSORLG00000001850 RAB39B
ENSORLG00000008345 rab39b
ENSACLG00000009468 RAB39B
ENSACLG00000022893 RAB39B
ENSACLG00000027590 RAB39B
ENSNBRG00000005082 RAB39B
ENSNBRG00000018106 RAB39B
ENSSMAG00000001953 rab39bb
ENSGACG00000001950 RAB39B
ENSGACG00000020437 RAB39B
BL22458 ENSG00000268359
ENSLACG00000002332 LOC102356101
ENSLACG00000016074 RAB39B
FBgn0071493 Dpse\GA11442
FBgn0188439 Dsim\GD16855
Compare expression
Orthology information comes from OMA : WBGene00004286.

Paralogs (same species)

Paralogy information comes from OMA : WBGene00004286.

Cross-references

Ensembl

UniProtKB/TrEMBL