Caenorhabditis elegans

Gene : slc-25A18.1 - WBGene00008979 - Caenorhabditis elegans (nematode)

General information

Gene identifier

WBGene00008979

Name

slc-25A18.1

Description

SLC (SoLute Carrier) homolog [Source:UniProtKB/TrEMBL;Acc:Q93540]

Synonym(s)

Orthologs

Paralogs

Expression graph

slc-25A18.1slc-25A18.1[-]anatomical entity[+]musculature[+]multicellular organism[+]digestive systemExpression score020406080100Not expressedNo data
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Expression table

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000922embryo82.494.62e-14See source data
RSCAIE
UBERON:0002548larva81.871.26e-11See source data
RSCAIE
UBERON:0007023adult organism76.127.52e-12See source data
RSCAIE
WBbt:0005451pharyngeal muscle cell (C elegans)74.299.99e-6See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
WBbt:0005784germ line (C elegans)69.070.082See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

  • Affymetrix data: GEO

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Ecdysozoa

5 genes

FBgn0037970 GC2
FBgn0260743 GC1
FBgn0074924 Dpse\GA14898
FBgn0248798 Dpse\GA27431
FBgn0190310 Dsim\GD18793
Compare expression
Bilateria

50 species

Homo sapiens (human)

Mus musculus (mouse)

Danio rerio (zebrafish)





Drosophila melanogaster (fruit fly)

Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)

Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)

Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)

Callithrix jacchus (White-tufted-ear marmoset)

Cercocebus atys (Sooty mangabey)

Macaca fascicularis (Crab-eating macaque)

Macaca mulatta (macaque)

Macaca nemestrina (Pig-tailed macaque)

Papio anubis (Olive baboon)

Gorilla gorilla (gorilla)

Pan paniscus (bonobo)

Pan troglodytes (chimpanzee)

Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)

Manis javanica (Malayan pangolin)

Rattus norvegicus (rat)

Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)


Xenopus tropicalis (western clawed frog)


Anolis carolinensis (green anole)

Lepisosteus oculatus (Spotted gar)


Anguilla anguilla (European freshwater eel)



Astyanax mexicanus (Blind cave fish)

Esox lucius (Northern pike)



Salmo salar (Atlantic salmon)





Gadus morhua (Atlantic cod)



Poecilia reticulata (Guppy)



Oryzias latipes (Japanese rice fish)



Astatotilapia calliptera (Eastern happy)



Neolamprologus brichardi (Fairy cichlid)



Scophthalmus maximus (Turbot)



Gasterosteus aculeatus (Three-spined stickleback)



Nothobranchius furzeri (Turquoise killifish)



Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)


Drosophila pseudoobscura ()

Drosophila simulans ()

119 genes

ENSG00000177542 SLC25A22
ENSG00000182902 SLC25A18
ENSMUSG00000004902 Slc25a18
ENSMUSG00000019082 Slc25a22
ENSDARG00000013749 slc25a55b
ENSDARG00000020718 slc25a22a
ENSDARG00000020893 slc25a55a
ENSDARG00000058336 slc25a22b
ENSDARG00000070717 slc25a18
ENSDARG00000110854 slc25a55a
FBgn0037970 GC2
FBgn0260743 GC1
ENSCAFG00000016143 SLC25A18
ENSFCAG00000008080 SLC25A18
ENSECAG00000008033 SLC25A18
ENSECAG00000011808 SLC25A22
ENSSSCG00000012844 SLC25A22
ENSBTAG00000001229 SLC25A22
ENSCHIG00000013696 SLC25A22
ENSOARG00000005859 SLC25A22
ENSOCUG00000006959
ENSCPOG00000001367 SLC25A18
ENSCPOG00000001525 SLC25A22
ENSGALG00000039335 SLC25A22
ENSMGAG00000009101 SLC25A22
ENSOANG00000003251 SLC25A18
ENSOANG00000036420 SLC25A22
ENSCJAG00000011869 SLC25A22
ENSCJAG00000017263 SLC25A18
ENSCATG00000037815 SLC25A22
ENSCATG00000040300 SLC25A18
ENSMFAG00000039130 SLC25A22
ENSMFAG00000039209 SLC25A18
ENSMMUG00000007513 SLC25A22
ENSMMUG00000031121 SLC25A18
ENSMNEG00000037207 SLC25A18
ENSMNEG00000043458 SLC25A22
ENSPANG00000016426 SLC25A22
ENSPANG00000017557 SLC25A18
ENSGGOG00000010764 SLC25A22
ENSGGOG00000015021 SLC25A18
ENSPPAG00000041605 SLC25A18
ENSPPAG00000042802 SLC25A22
ENSPTRG00000014038 SLC25A18
ENSPTRG00000047433 SLC25A22
ENSMICG00000001073 SLC25A22
ENSCSAG00000010671 SLC25A22
ENSCSAG00000014445 SLC25A18
108400235 SLC25A18
108408648 SLC25A22
ENSRNOG00000042731 Slc25a18
ENSRNOG00000049944 LOC100911440
ENSMODG00000018449 SLC25A18
108708060 slc25a22l.L
108715179 slc25a22.S
399054 slc25a22.L
ENSXETG00000000870 slc25a18
ENSXETG00000015362 slc25a22
ENSXETG00000023334 slc25a22l
ENSACAG00000003406 LOC100553181
ENSACAG00000012327 SLC25A18
ENSLOCG00000000003 slc25a22a
ENSLOCG00000010612 slc25a55b
ENSLOCG00000016583 slc25a18
118207824 LOC118207824
118210726 LOC118210726
118215441 slc25a22a
118231017 slc25a18
ENSAMXG00000011678 slc25a55b
ENSAMXG00000016140 slc25a22a
ENSELUG00000018292 slc25a18
ENSELUG00000021893
ENSELUG00000023559 slc25a55a
ENSELUG00000023968 slc25a22a
ENSSSAG00000010234 slc25a18
ENSSSAG00000014172 slc25a22b
ENSSSAG00000056168 slc25a22b
ENSSSAG00000067290 slc25a18
ENSSSAG00000070648 slc25a55a
ENSSSAG00000077193 slc25a55a
ENSGMOG00000004986 slc25a18
ENSGMOG00000011003 slc25a55b
ENSGMOG00000017043 slc25a55a
ENSGMOG00000017830 slc25a22a
ENSPREG00000001854 slc25a55b
ENSPREG00000011745 slc25a22a
ENSPREG00000011876 slc25a55a
ENSPREG00000020480 slc25a18
ENSORLG00000006312 slc25a22a
ENSORLG00000006483 slc25a55a
ENSORLG00000008520 slc25a55b
ENSORLG00000015884 slc25a18
ENSACLG00000008604 slc25a55b
ENSACLG00000008987 slc25a18
ENSACLG00000012704 syt7a
ENSACLG00000022495 slc25a55a
ENSNBRG00000008140 slc25a55a
ENSNBRG00000014340 slc25a22a
ENSNBRG00000017004 slc25a18
ENSNBRG00000019504 slc25a55b
ENSSMAG00000006201 slc25a55b
ENSSMAG00000009250 slc25a55a
ENSSMAG00000011613 slc25a18
ENSSMAG00000013374 slc25a22a
ENSGACG00000005247 slc25a55a
ENSGACG00000005489 slc25a22a
ENSGACG00000009866 slc25a55b
ENSGACG00000013705 slc25a18
ENSNFUG00015005102 slc25a22a
ENSNFUG00015005658 slc25a55b
ENSNFUG00015012930 slc25a55a
ENSNFUG00015024191 SLC25A18
BL15841 SLC25A18
ENSLACG00000006319
ENSLACG00000015851 SLC25A22
ENSLACG00000018554 slc25a55b
FBgn0074924 Dpse\GA14898
FBgn0248798 Dpse\GA27431
FBgn0190310 Dsim\GD18793
Compare expression
Orthology information comes from OMA : WBGene00008979.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Chromadorea

1 gene

WBGene00018901 slc-25A18.2

Compare expression: table | graph

Metazoa

10 genes

Compare expression: table | graph

Paralogy information comes from OMA : WBGene00008979.

Cross-references

Ensembl

WBGene00008979 (slc-25A18.1)

UniProtKB/TrEMBL