Caenorhabditis elegans

Gene : trap-1 - WBGene00022122 - Caenorhabditis elegans (nematode)

General information

Gene identifier

WBGene00022122

Name

trap-1

Description

TRanslocon-Associated Protein [Source:UniProtKB/TrEMBL;Acc:Q95XT5]

Synonym(s)

Orthologs

Expression graph

80%

Expression table

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
WBbt:0005451pharyngeal muscle cell (C elegans)98.61<= 1.00e-14See source data
RSCAIE
UBERON:0000922embryo97.26<= 1.00e-14See source data
RSCAIE
UBERON:0007023adult organism97.11<= 1.00e-14See source data
RSCAIE
UBERON:0002548larva95.69<= 1.00e-14See source data
RSCAIE
WBbt:0005784germ line (C elegans)89.110.002See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Ecdysozoa

2 genes

FBgn0028327 l(1)G0320
FBgn0077101 Dpse\GA17087
Compare expression
Bilateria

48 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)

Anguilla anguilla (European freshwater eel)


Esox lucius (Northern pike)

Salmo salar (Atlantic salmon)



Gadus morhua (Atlantic cod)

Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)

Astatotilapia calliptera (Eastern happy)

Neolamprologus brichardi (Fairy cichlid)

Scophthalmus maximus (Turbot)

Gasterosteus aculeatus (Three-spined stickleback)










Nothobranchius furzeri (Turquoise killifish)

Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

Drosophila pseudoobscura ()

75 genes

ENSG00000124783 SSR1
ENSMUSG00000021427 Ssr1
ENSDARG00000101627 ssr1
FBgn0028327 l(1)G0320
ENSCAFG00000009533 SSR1
ENSFCAG00000004763 SSR1
ENSECAG00000019520 SSR1
ENSSSCG00000001022 SSR1
ENSBTAG00000022731 SSR1
ENSCHIG00000021769 SSR1
ENSOARG00000018017 SSR1
ENSOCUG00000009083 SSR1
ENSCPOG00000039953 SSR1
ENSGALG00000012798 SSR1
ENSMGAG00000003888 SSR1
ENSOANG00000014818 SSR1
ENSOANG00000048793 SSR1Y
ENSCJAG00000044370 SSR1
ENSCATG00000037180 SSR1
ENSMFAG00000039497 SSR1
ENSMMUG00000002147 SSR1
ENSMNEG00000039105 SSR1
ENSPANG00000015753 SSR1
ENSGGOG00000004566 SSR1
ENSPPAG00000031246 SSR1
ENSPTRG00000017698 SSR1
ENSMICG00000003639
ENSCSAG00000007383 SSR1
108399732 SSR1
ENSRNOG00000014165 Ssr1
ENSMODG00000028246 SSR1
379611 ssr1.L
399231 ssr1.S
ENSXETG00000020431 ssr1
ENSACAG00000000590 SSR1
ENSLOCG00000002800
ENSLOCG00000011718 ssr1
118211935 LOC118211935
118225094 LOC118225094
118234267 ssr1
ENSELUG00000016155 ssr1
ENSELUG00000022465
ENSSSAG00000045647
ENSSSAG00000053014 ssra
ENSSSAG00000071393 ssr1
ENSSSAG00000080254 ssr1
ENSGMOG00000007557 ssr1
ENSGMOG00000015083
ENSPREG00000010403 ssr1
ENSPREG00000013148
ENSORLG00000003179 ssr1
ENSORLG00000015626 LOC101155508
ENSACLG00000005091
ENSACLG00000023894 ssr1
ENSNBRG00000009186 ssr1
ENSNBRG00000011910
ENSSMAG00000005330
ENSSMAG00000011374 ssr1
ENSGACG00000000224 ssr1
ENSGACG00000000277 ssr1
ENSGACG00000000425
ENSGACG00000000531 SSR1
ENSGACG00000000535 ssr1
ENSGACG00000001764 SSR1
ENSGACG00000001766 ssr1
ENSGACG00000001775 ssr1
ENSGACG00000001833 ssr1
ENSGACG00000014184 ssr1
ENSGACG00000020115 ssr1
ENSNFUG00015002672 SSR1
ENSNFUG00015020617 OLA.5240
BL06080 SSR1
ENSLACG00000012465 SSR1
ENSLACG00000018553
FBgn0077101 Dpse\GA17087
Compare expression
Orthology information comes from OMA : WBGene00022122.

Cross-references

Ensembl

UniProtKB/TrEMBL