Gene : LOC108705674 - 108705674 - Xenopus laevis (African clawed frog)
General information
Gene identifier
108705674
Name
LOC108705674
Description
Histone H2B 1.2
Synonym(s)
Orthologs
Paralogs
Expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| CL:0000023oocyte | 82.23 | 7.58e-9 | See source data | RSCAIE |
| UBERON:0000992ovary | 77.13 | 3.25e-10 | See source data | RSCAIE |
| CL:0000025egg cell | 66.71 | 6.28e-5 | See source data | RSCAIE |
| UBERON:0004734gastrula | 65.03 | 6.11e-6 | See source data | RSCAIE |
| UBERON:0000307blastula | 54.83 | 2.18e-5 | See source data | RSCAIE |
| UBERON:0004455neurula embryo | 33.05 | 0.003 | See source data | RSCAIE |
| UBERON:0000473testis | 25.83 | 0.037 | See source data | RSCAIE |
Showing 1 to 7 of 7 entries
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000945stomach | 5.72 | 1 | See source data | RSCAIE |
| UBERON:0000014zone of skin | 6.13 | 1 | See source data | RSCAIE |
| UBERON:0000160intestine | 6.17 | 1 | See source data | RSCAIE |
| UBERON:0001846internal ear | 6.39 | 1 | See source data | RSCAIE |
| UBERON:0000948heart | 6.84 | 1 | See source data | RSCAIE |
| UBERON:0001264pancreas | 8.74 | 1 | See source data | RSCAIE |
| UBERON:0000955brain | 9.34 | 0.721 | See source data | RSCAIE |
| UBERON:0000019camera-type eye | 11.58 | 0.224 | See source data | RSCAIE |
| UBERON:0002048lung | 16.27 | 0.371 | See source data | RSCAIE |
| UBERON:0002106spleen | 18.39 | 0.245 | See source data | RSCAIE |
| UBERON:0002107liver | 20.28 | 0.332 | See source data | RSCAIE |
| UBERON:0002385muscle tissue | 21.18 | 0.357 | See source data | RSCAIE |
| UBERON:0002113kidney | 23.75 | 0.054 | See source data | RSCAIE |
Showing 1 to 13 of 13 entries
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Orthologs
Showing 1 to 5 of 5 entries
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Xenopus | 15 genes 108695577 LOC108695577 108695579 LOC108695579 108703793 LOC108703793 108703794 LOC108703794 108703795 LOC108703795 108703796 LOC108703796 108703797 LOC108703797 108703940 LOC108703940 108704302 LOC108704302 108704303 LOC108704303 108704304 LOC108704304 108716546 LOC108716546 108717645 H2B 108717646 H2B 446588 hist1h2bj.L | Compare expression |
Showing 1 to 1 of 1 entries
Cross-references
RefSeq
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL