Gasterosteus aculeatus

Gene : sgca - ENSGACG00000003356 - Gasterosteus aculeatus (Three-spined stickleback)

General information

Gene identifier

ENSGACG00000003356

Name

sgca

Description

sarcoglycan, alpha [Source:ZFIN;Acc:ZDB-GENE-041111-121]

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002385muscle tissue95.092.73e-5See source data
RSCAIE
UBERON:0000014zone of skin93.842.93e-4See source data
RSCAIE
UBERON:0000948heart83.980.001See source data
RSCAIE
UBERON:0000019camera-type eye46.100.014See source data
RSCAIE
UBERON:0000922embryo42.160.033See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002107liver23.010.368See source data
RSCAIE
UBERON:0001894diencephalon24.120.12See source data
RSCAIE
UBERON:0000473testis25.180.166See source data
RSCAIE
UBERON:0000206pharyngeal gill27.910.121See source data
RSCAIE
UBERON:0002106spleen28.830.378See source data
RSCAIE
UBERON:0001893telencephalon30.020.077See source data
RSCAIE
UBERON:0000080mesonephros31.840.144See source data
RSCAIE
UBERON:0007132head kidney37.060.173See source data
RSCAIE
CL:0002563intestinal epithelial cell37.170.152See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

80%

Paralogs (same species)

80%

Cross-references

80%