Mus musculus

Gene : Sgca - ENSMUSG00000001508 - Mus musculus (mouse)

General information

Gene identifier

ENSMUSG00000001508

Name

Sgca

Description

sarcoglycan, alpha (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:894698]

Synonym(s)

asg,50dag,adhalin

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0004252hindlimb stylopod muscle99.00<= 1.00e-14See source data
RSCAIE
UBERON:0004454tarsal region98.450.002See source data
RSCAIE
UBERON:0001509triceps brachii98.040.01See source data
RSCAIE
UBERON:0001128sternocleidomastoid97.760.01See source data
RSCAIE
UBERON:0001386extensor digitorum longus97.712.19e-4See source data
RSCAIE
UBERON:0001598temporalis muscle97.530.01See source data
RSCAIE
UBERON:0001379vastus lateralis97.450.007See source data
RSCAIE
UBERON:0002094interventricular septum97.382.19e-4See source data
RSCAIE
UBERON:0001562digastric muscle group97.360.01See source data
RSCAIE
UBERON:0001665triceps surae97.346.20e-4See source data
RSCAIE
UBERON:0011907gastrocnemius medialis97.270.002See source data
RSCAIE
UBERON:0001385tibialis anterior97.260.002See source data
RSCAIE
UBERON:0001389soleus muscle97.170.001See source data
RSCAIE
UBERON:0011905plantaris97.052.19e-4See source data
RSCAIE
UBERON:0001083myocardium of ventricle96.894.82e-4See source data
RSCAIE
UBERON:0002080heart right ventricle96.860.01See source data
RSCAIE
UBERON:0001134skeletal muscle tissue96.53<= 1.00e-14See source data
RSCAIE
UBERON:0001597masseter muscle96.395.11e-4See source data
RSCAIE
UBERON:0003382cardiac muscle of left ventricle96.332.19e-4See source data
RSCAIE
UBERON:0001103diaphragm95.914.05e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • in situ hybridization data: MGI
  • single-cell RNA-Seq data: Bgee
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0005876undifferentiated genital tubercle19.761See source data
RSCAIE
UBERON:0007144embryonic post-anal tail21.231See source data
RSCAIE
UBERON:0005343cortical plate27.521See source data
RSCAIE
UBERON:0003053ventricular zone27.841See source data
RSCAIE
UBERON:6001060embryonic brain28.830.629See source data
RSCAIE
UBERON:0004023ganglionic eminence32.431See source data
RSCAIE
UBERON:0004024medial ganglionic eminence34.250.1See source data
RSCAIE
UBERON:0001891midbrain36.600.326See source data
RSCAIE
UBERON:0004364ectoplacental cone36.650.213See source data
RSCAIE
UBERON:0003307floor plate of midbrain36.710.429See source data
RSCAIE
UBERON:0002257ventral horn of spinal cord36.930.82See source data
RSCAIE
UBERON:0001853utricle of membranous labyrinth37.190.836See source data
RSCAIE
CL:0002607migratory enteric neural crest cell37.720.954See source data
RSCAIE
UBERON:0005151metanephric proximal tubule38.140.969See source data
RSCAIE
UBERON:0005211renal medulla interstitium38.170.975See source data
RSCAIE
UBERON:0003220metanephric mesenchyme38.210.969See source data
RSCAIE
UBERON:0002038substantia nigra38.280.99See source data
RSCAIE
UBERON:0003697abdominal wall38.330.733See source data
RSCAIE
UBERON:0002532epiblast (generic)38.351See source data
RSCAIE
UBERON:0005185renal medulla collecting duct38.480.994See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • in situ hybridization data: MGI
  • single-cell RNA-Seq data: Bgee
  • RNA-Seq data: Bgee

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Murinae

1 species

Compare expression
Rodentia

2 species

Compare expression
Glires

3 species

Compare expression
Euarchontoglires

15 species

Homo sapiens (human)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

22 species

Homo sapiens (human)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

23 species

Homo sapiens (human)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Amniota

24 species

Homo sapiens (human)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Compare expression
Euteleostomi

35 species

Homo sapiens (human)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Orthology information comes from OMA : ENSMUSG00000001508.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
ChordataCompare expression
Paralogy information comes from OMA : ENSMUSG00000001508.

Cross-references

CCDS

CCDS25266 (CCDS25266.1)

Ensembl

MGI

MGI:894698 (Sgca)

UniProtKB/Swiss-Prot